A code to generate atomic structure with symmetry
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Jul 24, 2026 - Python
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nanoparticles
Here are 61 public repositories matching this topic...
Free and open-source code package designed to perform PyMEEP FDTD simulations applied to Plasmonics (UBA+CONICET) [Buenos Aires, Argentina]
fdtd meep electromagnetism nanoparticles plasmonics nanophotonics simulations-physics absorption-spectra scattering-physics
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Jan 19, 2022 - Python
The Otago Research Genetic Algorithm for Nanoclusters, Including Structural Methods and Similarity (Organisms) program is a genetic algorithm designed to globally optimise nanoclusters (also known as clusters or nanoparticles)
genetic-algorithm clusters nanoparticles ase university-of-otago asap3 atomic-simulation-environment nanoclusters jupyter-binder predation-operator fitness-operator otago-university common-neighbour-analysis common-neighbor-analysis
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Jan 25, 2026 - Python
Python Code for Processing LAMMPS Data generated for two data types: LAMMPS trajectory file and LAMMPS dump files. Subsequently, the code involves post-processing of the data to give interfacial heat flux, temperature discontinuity and ultimately interfacial conductance using the atomistic nodal approach. Pythode code is also presented as a work…
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Oct 1, 2021 - Jupyter Notebook
A Matlab code for tracking colloidal fluorescent nanoparticles.
matlab image-processing video-processing subpixel particle-tracking nanoparticles colloids nanoparticle
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Aug 26, 2018 - MATLAB
Related codes for Generative learning of morphological and contrast heterogeneities for self-supervised electron micrograph segmentation
generative-adversarial-network image-generation electron-microscopy nanoparticles microscopy-images particle-size-distribution catalysts transmission-electron-microscopy segmentation-models electron-microscopy-datasets electron-microscopic-images nanoclusters scanning-transmission-electron-microscope segment-anything-model electron-microscopy-image-segmentation single-atom-catalysts
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Oct 29, 2025 - Python
A molecular dynamics approach to study the permeation of nanoparticles through lipid bilayer
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Jan 28, 2023 - Shell
"aggregate_gen" -- An efficient C++ code for generating fractal cluster of spheres
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Dec 13, 2019 - C++
PBM-CFD solvers for predicting particle size distributions
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Feb 12, 2024 - C++
Desktop application for detection size and shape of gold nanoparticles and nanorods from TEM image (bachelor's project)
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May 17, 2023 - Jupyter Notebook
Iterative Particle Analysis Tool introduced in paper https://academic.oup.com/mam/advance-article/doi/10.1093/micmic/ozad036/7162605
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May 16, 2023 - Python
[AAAS 2025] NEXT 3D is a preclinical tool to optimize nanoparticle designs for BBB penetration in the treatment of glioblastoma multiforme, a proliferative central nervous system cancer.
cancer cancer-imaging-research cancer-research nanoparticles glioblastoma glioma nanoparticle nanoparticle-analysis glioblastoma-drug-discovery
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Jun 18, 2025
Nanotribology Simulation Framework. Create modern workflows to automate the study of friction wear with Lammps and OVITO 🚀
simulation molecular-dynamics lammps materials-science friction nanoparticles ovito tribology atomistic gpu-accelerated nanotribology fretting
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May 15, 2025 - Python
A local scientific tool for rod sizing in nanoparticle research.
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Jun 18, 2026 - HTML
C++ template library for Discrete Element Method (DEM) simulations
aerosol aggregate physics-simulation particle-physics atmospheric-science nanoparticles discrete-element-method atmospheric-chemistry particle-dynamics aerosols
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Jun 5, 2026 - C++
NanoTrackJ is an ImageJ/Fiji plugin to characterize the size of nanoparticles by its diffusion trajectories.
imagej diffusion-coefficient nanoparticles hydrodynamic-diameter size-distribution fiji-plugin diffusion-trajectories
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Jan 31, 2018 - Java
Analyze two-component nanoparticle properties for classical molecular dynamics simulations
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Oct 24, 2022 - Python
A python package for packing nanoclusters into supramolecular cages.
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Jul 10, 2026 - Python
Shared-scene Fisher/CRLB simulator for synthetic single-particle microscopy.
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Jun 13, 2026 - Python
AI-SAXS: differentiable machine-learning framework for SAXS analysis of lipid nanoparticles.
machine-learning inverse-problems scattering nanoparticles saxs jax lnp scientific-machine-learning lipid-nanoparticles small-angle-x-ray-scattering ai-saxs
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Jun 8, 2026 - Jupyter Notebook
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