Issues

• Rerun sct_process_segmentation with smooth interpolation on spine-generic

  spinalcordtoolbox/PAM50-normalized-metrics#65 · Filter by author valosekj opened on Sep 24, 2026
  

• whole-spine NaN slices

  spinalcordtoolbox/PAM50-normalized-metrics#64 · Filter by author valosekj opened on Sep 24, 2026
  3

• Update the whole-spine dataset

  dataset: whole-spine
  spinalcordtoolbox/PAM50-normalized-metrics#61 · Filter by author valosekj opened on Jul 15, 2026
  1

  

• NaNs for some slices in PAM50 CSVs

  spinalcordtoolbox/PAM50-normalized-metrics#60 · Filter by author valosekj opened on Jul 15, 2026
  8

• Consider using polars instead of pandas

  spinalcordtoolbox/PAM50-normalized-metrics#56 · Filter by author valosekj opened on Jul 7, 2026

• Compare DTI fit across different number of repetitions

  dwi normative database
  spinalcordtoolbox/PAM50-normalized-metrics#54 · Filter by author valosekj opened on Jun 12, 2026
  4

• Adding Large Whole-Spine T2w Sagittal Dataset to the Normative Database

  spinalcordtoolbox/PAM50-normalized-metrics#50 · Filter by author valosekj opened on May 11, 2026

• Is git okay for thousands of CSV or should we consider git-annex

  spinalcordtoolbox/PAM50-normalized-metrics#46 · Filter by author valosekj opened on Apr 22, 2026
  1

• Add data from philadelphia-pediatric

  spinalcordtoolbox/PAM50-normalized-metrics#43 · Filter by author sandrinebedard opened on Apr 14, 2026
  1

• Automatically add morphometrics from open-access and internal datasets

  good internship project
  spinalcordtoolbox/PAM50-normalized-metrics#42 · Filter by author valosekj opened on Apr 8, 2026

• Add symmetry measures

  spinalcordtoolbox/PAM50-normalized-metrics#40 · Filter by author valosekj opened on Apr 8, 2026
  5

• Spinal cord segmentation corrections for some subjects from whole-spine

  dataset: whole-spine
  spinalcordtoolbox/PAM50-normalized-metrics#39 · Filter by author valosekj opened on Apr 1, 2026
  4

• Standardize columns in participants.tsv across datasets

  spinalcordtoolbox/PAM50-normalized-metrics#38 · Filter by author valosekj opened on Mar 28, 2026
  3

  

• Strategy how to deal with multiple sessions

  spinalcordtoolbox/PAM50-normalized-metrics#35 · Filter by author valosekj opened on Mar 26, 2026

• Slice removal strategy

  spinalcordtoolbox/PAM50-normalized-metrics#34 · Filter by author valosekj opened on Mar 24, 2026
  4

• Strategy how to harmonize morphometrics across different contrasts

  spinalcordtoolbox/PAM50-normalized-metrics#33 · Filter by author valosekj opened on Mar 21, 2026
  1

• Update values with new AP diameter + symmetry metrics

  spinalcordtoolbox/PAM50-normalized-metrics#29 · Filter by author sandrinebedard opened on Jan 27, 2026

• Strategy to include subjects with mild compression

  spinalcordtoolbox/PAM50-normalized-metrics#25 · Filter by author valosekj opened on Mar 27, 2025

• Add an include list

  spinalcordtoolbox/PAM50-normalized-metrics#21 · Filter by author sandrinebedard opened on Mar 11, 2025
  1

• Strategy for long term updates of segmentation and normative values

  spinalcordtoolbox/PAM50-normalized-metrics#18 · Filter by author sandrinebedard opened on Feb 18, 2025

• Add DTI and MT normative values

  dwi normative database
  spinalcordtoolbox/PAM50-normalized-metrics#17 · Filter by author valosekj opened on Jan 29, 2025
  3

  

• Compute normative values of adapted spinal canal occupation ratio (aSCOR) and spinal canal

  good internship project
  spinalcordtoolbox/PAM50-normalized-metrics#13 · Filter by author sandrinebedard opened on Jan 15, 2024
  3