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How many PCs are used?

Status: Open.

#34 In sanderlab/scPerturb;

· astaburuaga-garcia opened on Jan 12, 2026

nan vs control for Gasperini 2019 low MOI

Status: Open.

#33 In sanderlab/scPerturb;

· mdanb opened on Aug 12, 2025

Request to Add Missing Data (MimitouSmibert2021)

Status: Open.

#31 In sanderlab/scPerturb;

· caodudu opened on Apr 12, 2025

Squared instead of normal pairwise euclidean distance for e-distance calculation

Status: Open.

#30 In sanderlab/scPerturb;

· LisaSikkema opened on Feb 26, 2025

etest calculation 'control' groups and p-value adjustment

Status: Open.

#29 In sanderlab/scPerturb;

· ManuelMoradiellos opened on Nov 6, 2024

edist calculation difference in edist and etest

Status: Open.

#28 In sanderlab/scPerturb;

· rootze opened on Oct 28, 2024

website out of date

Status: Open.

#26 In sanderlab/scPerturb;

· tessadgreen opened on Jul 23, 2024

failure to reproduce significant perturbations in Norman et al.

Status: Open.

#25 In sanderlab/scPerturb;

· wconnell opened on Jul 1, 2024

UI improvements

documentationImprovements or additions to documentationImprovements or additions to documentation

python package

Status: Open.

#19 In sanderlab/scPerturb;

· stefanpeidli opened on Feb 14, 2024

Improve warning message if only one cell is perturbed in scperturbR

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

R package

Status: Open.

#17 In sanderlab/scPerturb;

· stefanpeidli opened on Feb 6, 2024

Add ZapateroTape2023

database

enhancementNew feature or requestNew feature or request

Status: Open.

#16 In sanderlab/scPerturb;

· stefanpeidli opened on Jan 12, 2024

Add HeinWeissman2021

database

enhancementNew feature or requestNew feature or request

Status: Open.

#15 In sanderlab/scPerturb;

· stefanpeidli opened on Jan 12, 2024