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Pull requests: nf-core/fetchngs

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Pull requests list

Add nf-core-utils plugin v0.5.0 for pipeline utilities
#385 opened Aug 14, 2026 by maxulysse Member Loading…
3 tasks done
1
Add ampliseq pipeline support
#383 opened Aug 13, 2026 by maxulysse Member Loading…
2 tasks done
1
Remove vulnerable PR-comment artifact pattern
#371 opened Jul 27, 2026 by mashehu Loading…
ampliseq samplesheet
#361 opened Oct 29, 2025 by brovolia Loading…
11 tasks
3
AWS mirrored SRA file download
#355 opened Aug 15, 2025 by tanaes Loading…
6 of 11 tasks
5
Proposal: nf-core-utils
#348 opened May 18, 2025 by edmundmiller Contributor Loading…
5 tasks
1.13.0
@edmundmiller
7
Update to Nextflow 25.04
#347 opened May 14, 2025 by bentsherman Loading… 1.13.0
2
Proposal: Rewrite SRA_RUNINFO_TO_FTP as native process
#337 opened Feb 21, 2025 by bentsherman Loading… 1.13.0
2
Add ampliseq samplesheet creation dependent on #790 in ampliseq
#324 opened Oct 29, 2024 by jenmuell • Draft
2 of 11 tasks
1.13.0
@jenmuell
2
Proposal: Static types
#309 opened May 1, 2024 by bentsherman • Draft 1.14.0
106
Cloud tests switched to using a matrix strategy
#289 opened Feb 22, 2024 by adamrtalbot Contributor • Draft
10 tasks
1.13.0
2
optimized resources
#269 opened Feb 6, 2024 by edmundmiller Contributor • Draft 1.13.0
3
@edmundmiller
4
Implement ffq
#100 opened Jun 30, 2022 by drpatelh Member • Draft 1.14.0
2
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