Issues

• Implement and test checkpointing for biogeochemistry models

  OceanBioME/OceanBioME.jl#463 · Filter by author ali-ramadhan opened on Oct 29, 2026

• ScaleNegativeTracers couples carbonate replicates through the shared organic tracers

  bug
  OceanBioME/OceanBioME.jl#452 · Filter by author ali-ramadhan opened on Oct 22, 2026

• Sediment and particle couplings to :DIC don't work with replicated or relabelled carbonate tracers

  bug
  OceanBioME/OceanBioME.jl#451 · Filter by author ali-ramadhan opened on Oct 22, 2026

• Custom tracer names for CarbonateSystem and ExplicitCalciumCarbonate (one replicate or multiple)

  feature
  OceanBioME/OceanBioME.jl#450 · Filter by author ali-ramadhan opened on Oct 22, 2026

• Negative chlorophyll crashes the light models

  OceanBioME/OceanBioME.jl#429 · Filter by author ali-ramadhan opened on Sep 25, 2026

• Getting to a validated global run/OAEMIP

  OceanBioME/OceanBioME.jl#423 · Filter by author jagoosw opened on Sep 18, 2026
  

• Repo is huge

  package
  OceanBioME/OceanBioME.jl#403 · Filter by author jagoosw opened on Sep 1, 2026
  6

• Testing strategy

  OceanBioME/OceanBioME.jl#397 · Filter by author jagoosw opened on Aug 24, 2026
  1

• Multiple calcium carbonate species

  OceanBioME/OceanBioME.jl#395 · Filter by author jagoosw opened on Aug 20, 2026
  1

• Duplicate and missing pages in parameters

  OceanBioME/OceanBioME.jl#387 · Filter by author MaceKuailv opened on Jul 21, 2026

• Add wrappers for standard outputs like NPP

  OceanBioME/OceanBioME.jl#383 · Filter by author jagoosw opened on Jun 19, 2026

• Automate CO2 boundary condition setup for multiple carbon chemistries

  OceanBioME/OceanBioME.jl#374 · Filter by author jagoosw opened on May 18, 2026
  

• Implementing MARBL

  enhancement
  Feature

  OceanBioME/OceanBioME.jl#371 · Filter by author jagoosw opened on May 11, 2026
  2

• Generalise gas transfer velocity

  OceanBioME/OceanBioME.jl#368 · Filter by author jagoosw opened on May 8, 2026
  2

• Calcite saturation state is wrong

  OceanBioME/OceanBioME.jl#366 · Filter by author jagoosw opened on May 4, 2026

• Sugar Kelp test commented out

  OceanBioME/OceanBioME.jl#357 · Filter by author jagoosw opened on Apr 23, 2026

• Allow to share computation between kernels in particle models

  enhancementprofiling
  OceanBioME/OceanBioME.jl#321 · Filter by author Mikolaj-A-Kowalski opened on Dec 4, 2025
  

• Use value types to store model parameters

  enhancementprofiling
  OceanBioME/OceanBioME.jl#320 · Filter by author Mikolaj-A-Kowalski opened on Dec 4, 2025
  7

  

• Sediment model tests are commented out

  OceanBioME/OceanBioME.jl#289 · Filter by author jagoosw opened on Sep 17, 2025

• Should bPOM remineralisation produce sPOM in the LOBSTER model?

  questionscience
  OceanBioME/OceanBioME.jl#288 · Filter by author jagoosw opened on Sep 16, 2025
  6

• Simulation compilation times

  low_priority
  OceanBioME/OceanBioME.jl#282 · Filter by author Mikolaj-A-Kowalski opened on Aug 29, 2025

• Software Reproducibility

  OceanBioME/OceanBioME.jl#269 · Filter by author MarionBWeinzierl opened on Jul 17, 2025
  3

• Look into reason for slow performance on Dawn

  low_priorityprofiling
  OceanBioME/OceanBioME.jl#267 · Filter by author MarionBWeinzierl opened on Jul 8, 2025
  3

• Parameter docs pages are broken

  documentation
  OceanBioME/OceanBioME.jl#239 · Filter by author jagoosw opened on Jan 14, 2025

• Cannot run box model simulation with LOBSTER and scale_negatives = true

  bug
  OceanBioME/OceanBioME.jl#238 · Filter by author ali-ramadhan opened on Jan 7, 2025