Issues

• [BUG] Wrapup function fails when an atlas link has incomplete TLS certificates

  bug
  brainglobe/brainglobe-atlasapi#977 · Filter by author kjungwoo5 opened on Oct 1, 2026

• [Feature] structures in atlas must also be in ontology

  enhancement
  brainglobe/brainglobe-atlasapi#976 · Filter by author PolarBean opened on Oct 1, 2026

• [BUG] Published nmt_arm_sym_macaque_250um template fails Zstd decompression; local package works

  bug
  brainglobe/brainglobe-atlasapi#975 · Filter by author bahramani opened on Sep 30, 2026

• [BUG] Build error in fresh ARM based macOS environment

  bug
  brainglobe/brainglobe-atlasapi#966 · Filter by author IgorTatarnikov opened on Sep 25, 2026
  1

• [Feature] CynoBrain: A unified high-resolution framework for cross-modal data integration for macaque brain mapping

  enhancementnew-atlas
  brainglobe/brainglobe-atlasapi#964 · Filter by author PolarBean opened on Sep 23, 2026

• [BUG] australian_mouse_15um references an unidentified region in the parent path

  bug
  brainglobe/brainglobe-atlasapi#963 · Filter by author IgorTatarnikov opened on Sep 21, 2026
  1

• [Feature] Move atlas packaging data to SWC GIN

  enhancement
  brainglobe/brainglobe-atlasapi#959 · Filter by author IgorTatarnikov opened on Sep 9, 2026

• [Feature] Package wingdisc pouch atlas

  enhancement
  brainglobe/brainglobe-atlasapi#952 · Filter by author alessandrofelder opened on Sep 7, 2026

• [BUG] allen_mouse_100 seems broken due to invalid resolution?

  bug
  brainglobe/brainglobe-atlasapi#949 · Filter by author PolarBean opened on Sep 4, 2026

• Could we simplify and remove the core.Atlas base class?

  brainglobe/brainglobe-atlasapi#946 · Filter by author alessandrofelder opened on Sep 1, 2026
  1

• Handling regions with multiple parents

  brainglobe/brainglobe-atlasapi#943 · Filter by author kjungwoo5 opened on Aug 31, 2026
  3

• [Feature] update test_atlas_name_matches_lastversions() to print missing specific missing names

  enhancement
  brainglobe/brainglobe-atlasapi#942 · Filter by author PolarBean opened on Aug 16, 2026

• [BUG] Old dask version fetched via dependency resolution

  bug
  brainglobe/brainglobe-atlasapi#935 · Filter by author IgorTatarnikov opened on Aug 14, 2026

• [Feature] create lower resolution templates for high resolution atlases

  enhancement
  brainglobe/brainglobe-atlasapi#933 · Filter by author PolarBean opened on Aug 14, 2026
  4

• [Feature] create upload atlas to s3 script

  enhancement
  brainglobe/brainglobe-atlasapi#932 · Filter by author PolarBean opened on Aug 14, 2026

• [Feature] Add a quiet parameter/flag for BrainGlobeAtlas

  enhancement
  brainglobe/brainglobe-atlasapi#928 · Filter by author IgorTatarnikov opened on Aug 13, 2026

• [BUG] Deprecation warning from numpy

  bug
  brainglobe/brainglobe-atlasapi#926 · Filter by author IgorTatarnikov opened on Aug 12, 2026
  1

• [Feature] Ovine Atlas Labels

  enhancementlicensednew-atlas
  brainglobe/brainglobe-atlasapi#924 · Filter by author PolarBean opened on Aug 10, 2026

• [Feature] DARTEL dog brain atlas

  enhancementnew-atlas
  brainglobe/brainglobe-atlasapi#923 · Filter by author PolarBean opened on Aug 10, 2026
  1

• [Feature] Integrate neuroglancer json generation into wrapup

  enhancement
  brainglobe/brainglobe-atlasapi#919 · Filter by author PolarBean opened on Aug 7, 2026

• [Feature] packaging validation function to ensure all volumes have the same physical size

  enhancement
  brainglobe/brainglobe-atlasapi#917 · Filter by author PolarBean opened on Aug 7, 2026

• Improve atlas management tools

  enhancement
  brainglobe/brainglobe-atlasapi#916 · Filter by author adamltyson opened on Aug 7, 2026
  1

• Improve CLI

  enhancement
  brainglobe/brainglobe-atlasapi#915 · Filter by author adamltyson opened on Aug 7, 2026
  1

• [Feature] add a field for region descriptions in structures

  enhancement
  brainglobe/brainglobe-atlasapi#914 · Filter by author PolarBean opened on Aug 6, 2026
  1

• [Feature] epDevAtlas

  enhancementlicensednew-atlas
  brainglobe/brainglobe-atlasapi#913 · Filter by author PolarBean opened on Aug 6, 2026