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Agent notes

Runtime application code lives under pure_auto_codeql/.

  • Prefer: from pure_auto_codeql.configuration import get_llm_config, LLMRole
  • Prefer: from pure_auto_codeql.utils..., pure_auto_codeql.services..., etc.
  • User secrets: repo-root config/keys.toml (template: config/keys.example.toml)
  • CLI: uv run pure-auto-codeql ... or python Analyze.py ...
  • API: uvicorn pure_auto_codeql.api.server:app

See docs/package_architecture.md for the package layout.