Issues

• --outOverlap=N might be buggy..

  BackofenLab/IntaRNA#212 · Filter by author martin-raden opened on Nov 10, 2023
  1

  

• [R|python] CSV input wrapper call script

  BackofenLab/IntaRNA#211 · Filter by author martin-raden opened on Nov 2, 2023

• configure: check for boost -mt libs

  bug
  BackofenLab/IntaRNA#192 · Filter by author martin-raden opened on Dec 3, 2020

• Multiple output formats per one run

  feature request
  BackofenLab/IntaRNA#189 · Filter by author trachtok opened on Sep 21, 2020
  1

• [doc] extend subopt discussion

  BackofenLab/IntaRNA#188 · Filter by author martin-raden opened on Jun 22, 2020

• IntaRNAeval (C++)

  student project
  BackofenLab/IntaRNA#184 · Filter by author martin-raden opened on Jun 2, 2020
  

• nice to have: --out outXXXPerQ|T:...

  BackofenLab/IntaRNA#174 · Filter by author martin-raden opened on Oct 17, 2019

• AccConstr : support for VRNA constraint format

  BackofenLab/IntaRNA#146 · Filter by author martin-raden opened on Mar 14, 2019

• two-step approach with fast pre-filter

  student project
  BackofenLab/IntaRNA#145 · Filter by author martin-raden opened on Mar 4, 2019
  3

• [helix-based] optimize bulge breakpoint

  BackofenLab/IntaRNA#142 · Filter by author martin-raden opened on Feb 28, 2019
  5

• Concentration stuff

  BackofenLab/IntaRNA#141 · Filter by author martin-raden opened on Feb 26, 2019
  2

• [helix-based] context-sensitive helix-based predictions

  student project
  BackofenLab/IntaRNA#139 · Filter by author martin-raden opened on Feb 23, 2019
  1

• [helix-based] ideas for improvements

  student project
  BackofenLab/IntaRNA#136 · Filter by author martin-raden opened on Jan 14, 2019
  1

• python wrapper via pybind11 or boost::python

  student project
  BackofenLab/IntaRNA#132 · Filter by author martin-raden opened on Dec 6, 2018
  1

• add preprocessing scripts to repo

  BackofenLab/IntaRNA#108 · Filter by author martin-raden opened on Dec 7, 2017

• check literature

  BackofenLab/IntaRNA#46 · Filter by author martin-raden opened on Jan 20, 2017
  1

• Incorporate RNAplex model with seed heuristic

  student project
  BackofenLab/IntaRNA#37 · Filter by author martin-raden opened on Nov 25, 2016
  2

• Allow Multi loops in interaction region

  feature requeststudent project
  BackofenLab/IntaRNA#20 · Filter by author PatrickRWright opened on Oct 1, 2016
  8